PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016484749.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 197aa    MW: 22769.6 Da    PI: 10.108
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016484749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding254.3e-08140188348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                       W+t E ++lv++v q+G g+W+ I r       + ++ ++k++w+++l
   XP_016484749.1 140 YWSTPEVLKLVEGVSQYGVGRWTDIKRLYFqssAHHSPLDLKDKWRNLL 188
                      6**************************9988**9*************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.034133192IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.8E-10133190IPR009057Homeodomain-like
SuperFamilySSF466897.48E-14135189IPR009057Homeodomain-like
SMARTSM007171.3E-8137190IPR001005SANT/Myb domain
PfamPF002493.8E-6139188IPR001005SANT/Myb domain
CDDcd116601.52E-15